BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C07LP1|AL427734
(1011 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig774 1344 0.0
3x_Contig1253 588 e-168
>3x_Contig774
Length = 2612
Score = 1344 bits (676), Expect = 0.0
Identities = 689/694 (99%), Gaps = 1/694 (0%)
Strand = Plus / Minus
Query: 318 tatctaatccaaattctagttctctttctaatcctaaaaggtcatttatatcttggcact 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2600 tatctaatccaaattctagttctctttctaatcctaaaaggtcatttatatcttggcact 2541
Query: 378 caggagagccgttatgcgtttgctgatgacttagacccattggcgaatctagcacattct 437
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2540 caggagagccgttatgcgtttgctgatgacttagacccattggcgaatctagcacattct 2481
Query: 438 cactaggcctaggagggaagtcaagttcatggcttggtaaattatccgaatgaataccaa 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2480 cactaggcctaggagggaagtcaagttcatggcttggtaaattatccgaatgaataccaa 2421
Query: 498 caagaggatcttgttgtgacgcggaacccatcatttgactagaaaacggctcatcgaacg 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2420 caagaggatcttgttgtgacgcggaacccatcatttgactagaaaacggctcatcgaacg 2361
Query: 558 atggaacgttagatgcagttctaccattgttcacttgttcttctagctgcgcttgavatg 617
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2360 atggaacgttagatgcagttctaccattgttcacttgttcttctagctgcgcttgaaatg 2301
Query: 618 tgcgttgatcttctcgtatttgatcatcaaaaccaccgtctgtcttcccctgttgttgct 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2300 tgcgttgatcttctcgtatttgatcatcaaaaccaccgtctgtcttcccctgttgttgct 2241
Query: 678 gttgctcgtgtaagaggggtaatctcacatattgcctgawatcggtcacttcgtcaatta 737
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2240 gttgctcgtgtaagaggggtaatctcacatattgcctgaaatcggtcacttcgtcaatta 2181
Query: 738 ccatttgtttaagttgttcaatctcattgacactttcaaaagaaaaatcgaacttttctg 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2180 ccatttgtttaagttgttcaatctcattgacactttcaaaagaaaaatcgaacttttctg 2121
Query: 798 tacatatcggttcatctgcaggatcatgccagatggacaaatacggatgttgtagagcat 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 tacatatcggttcatctgcaggatcatgccagatggacaaatacggatgttgtagagcat 2061
Query: 858 catcgactgttattctaagttgaggatcaaagcttaacattccctcaagaaggttcaatg 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 catcgactgttattctaagttgaggatcaaagcttaacattccctcaagaaggttcaatg 2001
Query: 918 catccgggttggcatttgggtataaagtgctgaatggtatctttgggatatatcctagct 977
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 2000 catccgggttggcatttgggtataaagtgctgaatggtatctttggaatatatcctagct 1941
Query: 978 ggtggatatagtcttgg-mgtttttcgatccgat 1010
||||||||||||||||| |||||||||||||||
Sbjct: 1940 ggtggatatagtcttggacgtttttcgatccgat 1907
>3x_Contig1253
Length = 5628
Score = 588 bits (296), Expect = e-168
Identities = 297/298 (99%)
Strand = Plus / Minus
Query: 1 atacagatttgatcaattgcatgacttttggctgtttacagtctgcagctgcacttgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atacagatttgatcaattgcatgacttttggctgtttacagtctgcagctgcacttgttt 255
Query: 61 cagcagacaattcgggtatgatacatttgtatatgcttcaaaagtagtcgattaaccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 cagcagacaattcgggtatgatacatttgtatatgcttcaaaagtagtcgattaaccaaa 195
Query: 121 ttacactatctcagttctttatagaatatgagaacatgagtatcttcgtattcactgaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttacactatctcagttctttatagaatatgagaacatgagtatcttcgtattcactgaag 135
Query: 181 ctgccagttttatgattgttatttgatgtgtaaatttgtacaaaggcatttcacgtatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ctgccagttttatgattgttatttgatgtgtaaatttgtacaaaggcatttcacgtatag 75
Query: 241 cagaatctgagcmacaatttatgttctacaaagagagtggatgaagctatataccaga 298
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 cagaatctgagcaacaatttatgttctacaaagagagtggatgaagctatataccaga 17
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7191
Number of Sequences: 1807
Number of extensions: 7191
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 2
length of query: 1011
length of database: 10,358,551
effective HSP length: 16
effective length of query: 995
effective length of database: 10,329,639
effective search space: 10277990805
effective search space used: 10277990805
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)